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T.W. Evans, M. Könneke, J.S. Lipp, R.A. Ad­hi­kari, H. Taub­ner, M. Elvert, and K.-U. Hin­richs  (2018)
Lipid bio­syn­thesis of Nitrosopumilus maritimus dis­sec­ted by lipid spe­cific ra­dioiso­tope prob­ing (lipid-RIP) un­der con­trast­ing am­monium sup­ply
Geochim. Cosmochim. Acta. 242: 51-63.


D. Gruen, D.T. Wang, M. Könneke, B.D. Top­cuo­glu, L.C. Stew­art, T. Gold­ham­mer, J.F. Holden, K.-U. Hin­richs and S. Ono (2018)
Ex­per­i­mental in­vest­ig­a­tion on the con­trols of clumped iso­to­po­logues and hy­dro­gen iso­tope ra­tios in mi­cro­bial meth­ane
Geochim. Cosmochim. Acta. 237: 339-356.


M. Er­mel, T. Behrendt, R. Os­wald, B. Der­stroff, D. Wu, S. Hohl­mann, C. Stön­ner, A. Pommeren­ing-Röser, M. Könneke, J. Wil­li­ams, F. X. Meixner, M. O. An­dreae, I. Trebs and M. Sörgel (2018)
Hy­droxylam­ine re­leased by ni­tri­fy­ing mi­croor­gan­isms is a pre­cursor for HONO emis­sion from dry­ing soils.
Scientific Reports (published online DOI:10.1038/s41598-018-20170-1)

2017 W. Qin et al.
Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminogenes gen. nov., sp. nov., Nitrosopumilus oxyclinae gen. nov., sp. nov., and Nitrosopumilus ureaphilus gen. nov., sp. nov., four marine ammonia-oxidizing archaea of the phylum Thaumarchaeota
Int. J. Syst. Evol. Microbiol. (published online doi:10.1099/ijsem.0.002416)
  F.J. Elling, M. Könneke, G.W. Nicol, et al. (2017)
Chemotaxonomic characterization of the thaumarchaeal lipidome
Environ. Microbiol. 19: 2681-2700.
  A. Huguet, T.B. Meador, F. Laggoun-Defarge, M. Könneke, S. Derenne, K.-U. HInrichs (2017)
Production rates of bacterial tetraether lipids and fatty acids in peatland under varying oxygen concentrations.
Geochim. Cosmochim. Acta. 203: 103-116.
2016 C. Zhu, S.G. Wakeham, F.J. Elling, A. Basse, G. Mollenhauer, G.J.M. Versteegh, M. Könneke and K.-U. Hinrichs. (2016)
Stratification of archaeal membrane lipids in the ocean and implication for adaptation and chemotaxonomy of planktonic archaea
Environ. Microbiol. 18: 4324-4336.
  S.J. Hurley, F.J. Elling, M. Könneke, C. Buchwald, S.D. Wankel, A:E. Santorro, J.S. Lipp, K.-U. Hinrichs and Ann Pearson (2016)
Influence of ammonia oxidation rate on thaumarchaeal lipid composition and the Tex86 proxy.
PNAS 113: 7762-7767.
  L. Hoppstock, F. Trusch, C. Lederer P. van West, M. Könneke and P. Bayer (2016)
NmPin from the marine thaumarchaeote Nitrosopumilus maritimus is an
active membrane associated prolyl isomerase.
BMC Biology 14: 53 (DOI: 10.1186/s12915-016-0274-1)
  X.-L. Liu, D. Birgel, F.J. Elling, P.A. Sutton, J.S. Lipp, R. Zhu, C. Zhang, M. Könneke, J. Peckmann, S.J. Rowland, R.E. Summons, K.-U. Hinrichs (2016)
From ether to acid: a plausible degradation pathway of glycerol dialkyl glycerol tetraethers
Geochim. Cosmochim. Acta 183: 138-152
  N. Widderich, L. Czech, F.J. Elling, M. Könneke, N. Stöveken, M. Pittelkow, R. Riclea, J.S. Dickschat, J. Heider, and E. Bremer (2016) Strangers in the archaeal world: osmostress-responsive biosynthesis of ectoine and hydroxyectoine by the marine thaumarchaeon Nitrosopumilus maritimus
Environ. Microbiol. 18(4): 1227-1248.
  F.J. Elling, K. Becker, M. Könneke, J.M. Schröder, M.Y. Kellermann, M. Thomm and K.-U. Hinrichs (2016) Respiratory quinones in Archaea: phylogenetic distribution and application as biomarker in the marine environment.
Environ. Microbiol. 18(2): 692-707.